AI Drug Discovery for Pharma and Biotech

Drug discovery

2

drugs

With orphan designations

Overview

Lysosomal acid lipase deficiency (LAL-D) is a rare autosomal recessive disorder caused by LIPA gene mutations, resulting in deficient enzyme activity and systemic accumulation of cholesteryl esters and triglycerides [1][2][4]. It manifests as a clinical spectrum: infantile-onset Wolman disease (rapid progression to liver failure) or later-onset cholesteryl ester storage disease (CESD), characterized by hepatosplenomegaly, dyslipidemia, and premature atherosclerosis [4][9][12]. Diagnosis involves LAL enzyme activity assays and molecular genetic testing [1][6]. Enzyme replacement therapy (sebelipase alfa) improves survival and metabolic parameters [6][8][18].

Population

Estimated prevalence 1/40,000–300,000 globally [1][7], with higher incidence in Persian-Jewish and Ashkenazi Jewish populations [12][16]. Infantile-onset cases occur in ~1/177,000 births [1][7].

Burden

Infantile forms are fatal without ERT (median survival <1 year) [1][16]. Later-onset disease causes progressive liver fibrosis (67% of cases), cirrhosis, and accelerated atherosclerosis [4][9]. Despite ERT, lifelong treatment costs remain high, with residual risks of hepatic and cardiovascular complications [3][6].

Therapies

  • Enzyme replacement therapy (sebelipase alfa) as first-line, reducing hepatic lipid content and improving lipid profiles [3][8][18].

  • Supportive measures: statins, ezetimibe, and low-fat diets to manage dyslipidemia [3][6][8].

  • Liver transplantation for end-stage cirrhosis, though outcomes vary [3][6].

Categories: rare endocrine diseases, rare genetic diseases, rare inborn errors of metabolism, rare transplant-related disorders

Research Papers

182 drug discovery papers about Lysosomal acid lipase deficiency, with 2 first-in-class and 7 next-in-class emerging drug candidates forecasted to outperform the average preclinical success rate. Recent publications:

182 drug discovery papers about Lysosomal acid lipase deficiency, with 2 first-in-class and 7 next-in-class emerging drug candidates forecasted to outperform the average preclinical success rate. Recent publications:

2026-07-21 | Lysosomal acid lipase deficiency in children: literature review and clinical observations

The enzyme lysosomal acid lipase, encoded by the LIPA gene, plays a key role in lipid metabolism in lysosomes. Mutations in the LIPA gene, of which about 120 have been registered, lead to a complete or partial absence of lysosomal acid lipase activity. This is accompanied by the accumulation of cholesterol esters and triglycerides in organs, primarily in the liver and spleen. There are two types of major phenotypic manifestations of lysosomal acid lipase deficiency: infantile lysosomal acid lipase deficiency (Wolman’s disease), and childhood/adult lysosomal acid lipase deficiency (cholesterol ester accumulation disease). The diagnosis of lysosomal acid lipase deficiency in children and adolescents should be established at an early stage of the disease, since the start of treatment affects the quality of life of patients in the long term. The article discusses both phenotypes of lysosomal acid lipase deficiency, etiology, pathogenesis, and approaches to the treatment of this disease. Clinical observations of patients with lysosomal acid lipase deficiency are also demonstrated.

Open article ↗



2026-07-01 | Liver-specific gene therapy based on self-complementary adeno-associated virus for lysosomal acid lipase deficiency

Introduction Lysosomal acid lipase deficiency is a rare, autosomal-recessive disorder caused by inactivating mutations of the lysosomal acid lipase gene and accumulation of cholesteryl esters and triglycerides in lysosomes. Treatment with recombinant lysosomal acid lipase is effective, but involves safety risks and the production of neutralizing antibodies. In the current study, we examined gene therapy with a liver-specific, self-complementary adeno-associated virus 8 (P6-13/rscAAV8) that encodes the human lysosomal acid lipase. Methods Two age cohorts of C57BL/6J mice with homozygous lysosomal acid lipase deletion were included. A young cohort (9 weeks of age; n = 8 per dose group, four males and four females) received a single intravenous administration of P6-13/rscAAV8 at 0.6, 2, or 6 × 10 12 viral genomes per kg (vg/kg). An old cohort (28 weeks of age; n = 4 per dose group, all males) received P6-13/rscAAV8 at 1 or 6 × 10 12 vg/kg. Control mice received a non-coding vector encoding green fluorescent protein. Results In the young cohort, the treatment restored expression of enzyme activity, normalized lipid profiles and body weight, mitigated enlargement of the liver and spleen, and reduced steatosis, inflammation, and fibrosis in the liver. These effects were associated with rescue of autophagic flux and mitochondrial function, as well as reduction of endoplasmic reticulum stress. Notably, the observed effects were much weaker when gene therapy with the same dose was conducted in the old cohort. Conclusions These findings suggest that P6-13/rscAAV8, when delivered early enough, may mitigate or even prevent the pathology of lysosomal acid lipase deficiency.

Open article ↗



2026-04-19 | Secreted enzyme uptake masks the in vivo phenotype of macrophage-specific lysosomal acid lipase deletion.

Lysosomal acid lipase (LAL) is so far the only known intracellular enzyme that is capable of hydrolyzing triglycerides and cholesteryl esters at an acidic pH inside the lysosome. Mutations in the LAL-encoding Lipa gene cause a rare autosomal recessive lysosomal storage disorder in humans with massive lipid accumulation. In mice, the loss of systemic LAL is associated with severe lipid accumulation, particularly in the liver and small intestine, accompanied by infiltration of lipid-filled CD68+-TREM2+ macrophages. We hypothesize that macrophages are among the key players in LAL deficiency and are responsible for lipid accumulation in the affected tissues. We generated macrophage (mac)- and macrophage/enterocyte-specific (mac/int-) LAL KO mice and performed morphological, histopathological, and functional analyses under chow- and high-fat/high-cholesterol diet-fed conditions. We observed that neither macLAL-KO nor mac/int-LAL KO mice replicated the phenotype of whole-body LAL KO mice, as lipoprotein secretion, lipid absorption, and lipid accumulation remained unaffected. However, the absence of macrophage LAL ameliorated diet-induced obesity in both mouse lines. Notably, the lipid accumulation observed in the lysosomes of macrophages from whole-body LAL KO mice was absent in macrophages from macLAL-KO mice, attributable to residual LAL enzyme activity despite genetic ablation. Treatment of macrophages from whole-body LAL KO mice with conditioned medium of hepatocytes from macLAL-KO mice effectively prevented lipid accumulation. These findings suggest that LAL secreted from hepatocytes, macrophages, and possibly other cell types in vivo corrects the phenotype of cell type-specific LAL deficiency, a key insight for guiding future gene therapy strategies.

Open article ↗



2026-03-29 | Lysosomal cholesteryl ester hydrolysis drives white matter repair by reprogramming microglia into a novel reparative state.

White matter repair relies on microglial clearance of cholesterol-rich myelin debris. Microglia have been reported to predominantly depend on de novo sterol synthesis to support this repair process. Lysosomal acid lipase (LAL) is the only known lysosomal enzyme capable of hydrolyzing cholesterol esters. In stark contrast to previous studies, we demonstrate here that LAL-mediated lysosomal lipolysis—not de novo sterol synthesis—serves as a central determinant of the microglial capacity to drive white matter repair. Using single-cell RNA sequencing, we identified a novel reparative microglial state characterized by simultaneously high expression of glycoprotein nonmetastatic melanoma protein B (GPNMB) and LAL. Following white matter injury, GPNMB+ microglia expanded and constituted the major microglial subset responsible for myelin debris engulfment. However, GPNMB+ microglia displayed context-dependent capacity to digest internalized myelin debris and mediate remyelination, with marked differences between reparable white matter injury and nonregenerative injury induced by white matter stroke (WMS). Transcriptomic profiling identified LAL as a key regulator of the reparative phenotype in GPNMB+ microglia. Independent of cytosolic lipases—widely regarded as synergistic mediators of LAL in cholesteryl ester hydrolysis, microglial LAL was both indispensable for myelin debris clearance and spontaneous remyelination in the reparable injury model, and sufficient to restore these processes following WMS-induced irreparable white matter injury. Mechanistically, LAL-mediated lysosomal lipolysis constituted the primary pathway for cholesteryl ester hydrolysis in microglia after white matter injury. This pathway converted cholesteryl esters into free cholesterol and activates liver X receptors (LXRs), both of which were required to reprogram microglial into the reparative state. Consistently, LXR activation alone was insufficient to rescue defective white matter repair caused by LAL deficiency. Hydroxypropyl-β-cyclodextrin (HβCD), an FDA-approved drug carrier, effectively lowers intracellular cholesterol levels through incompletely defined mechanisms. HβCD specifically upregulated LAL expression within white matter lesions and promoted remyelination via a LAL-dependent manner following WMS, supporting its potential as a therapeutic agent for WMS. Collectively, this study identifies lysosomal cholesterol ester hydrolysis as a novel therapeutic target for the treatment of irreversible white matter injury.

Open article ↗



2026-02-01 | Lysosomal acid lipase is essential in cholesterol-mediated mTORC1 signaling activation by maintaining a balance between cholesterol ester and free cholesterol in zebrafish

Cholesterol, as a signaling molecule, plays a critical role in regulating the mTORC1 signaling pathway within cells. Lysosomal acid lipase (LAL) is responsible for hydrolyzing cholesterol ester and triglyceride in lysosomes. However, the involvement of LAL in the regulation of the mTORC1 signaling pathway in animals remains controversial. Our study found that lal -deficient zebrafish exhibited retarded growth and reduced body protein content compared to wild type zebrafish. Correspondingly, the mTORC1 signaling pathway was significantly inhibited in the liver of lal −/− zebrafish. Additionally, both lal knockdown and lalistat (LAL inhibitor) treatments led to the accumulation of cholesterol ester (CE) and a decrease in free cholesterol (FC) within lysosomes of zebrafish liver (ZFL) cells. This imbalance inhibited the recruitment of mTORC1 to the lysosomal surface and suppressed the mTORC1 signaling pathway. Moreover, FC treatment promoted the recruitment of mTORC1 to the lysosomal surface and activated the mTORC1 signaling pathway regardless of LAL, whereas LDL-dependent mTORC1 activation required LAL. However, knockdown of slc38a9 (a cholesterol sensor) blocked the recruitment of mTORC1 in ZFL cells treated with FC or LDL. Furthermore, the interaction between P14 (a component of Ragulator complex) and RagA/C was weakened in ZFL cells following treatment with FC or LDL but was enhanced upon slc38a9 knockdown. In addition, both lal siRNA and lalistat treatments increased the interaction between P14 and RagA/C. Our findings indicated that LAL dysfunction hindered the recruitment and activation of mTORC1 through the Slc38a9-mediated lysosomal mTORC1-scaffolding complex in ZFL cells. This inhibition was associated with a decrease in lysosomal FC, which is detected by cholesterol sensor SLC38A9. Therefore, interventions targeting the role of LAL role in the hydrolysis of cholesterol esters within lysosomes could offer promising therapeutic strategies for diseases associated with dysregulated mTORC1 signaling in animals. • Lal -deficient zebrafish exhibited retarded growth and lower body protein content. • Lal -deficiency decreased lysosomal free cholesterol content in zebrafish liver cells. • Lysosomal cholesterol level regulated recruitment and activation of mTORC1 through Slc38a9.

Open article ↗



2026-07-21 | Lysosomal acid lipase deficiency in children: literature review and clinical observations

The enzyme lysosomal acid lipase, encoded by the LIPA gene, plays a key role in lipid metabolism in lysosomes. Mutations in the LIPA gene, of which about 120 have been registered, lead to a complete or partial absence of lysosomal acid lipase activity. This is accompanied by the accumulation of cholesterol esters and triglycerides in organs, primarily in the liver and spleen. There are two types of major phenotypic manifestations of lysosomal acid lipase deficiency: infantile lysosomal acid lipase deficiency (Wolman’s disease), and childhood/adult lysosomal acid lipase deficiency (cholesterol ester accumulation disease). The diagnosis of lysosomal acid lipase deficiency in children and adolescents should be established at an early stage of the disease, since the start of treatment affects the quality of life of patients in the long term. The article discusses both phenotypes of lysosomal acid lipase deficiency, etiology, pathogenesis, and approaches to the treatment of this disease. Clinical observations of patients with lysosomal acid lipase deficiency are also demonstrated.

Open article ↗



2026-07-01 | Liver-specific gene therapy based on self-complementary adeno-associated virus for lysosomal acid lipase deficiency

Introduction Lysosomal acid lipase deficiency is a rare, autosomal-recessive disorder caused by inactivating mutations of the lysosomal acid lipase gene and accumulation of cholesteryl esters and triglycerides in lysosomes. Treatment with recombinant lysosomal acid lipase is effective, but involves safety risks and the production of neutralizing antibodies. In the current study, we examined gene therapy with a liver-specific, self-complementary adeno-associated virus 8 (P6-13/rscAAV8) that encodes the human lysosomal acid lipase. Methods Two age cohorts of C57BL/6J mice with homozygous lysosomal acid lipase deletion were included. A young cohort (9 weeks of age; n = 8 per dose group, four males and four females) received a single intravenous administration of P6-13/rscAAV8 at 0.6, 2, or 6 × 10 12 viral genomes per kg (vg/kg). An old cohort (28 weeks of age; n = 4 per dose group, all males) received P6-13/rscAAV8 at 1 or 6 × 10 12 vg/kg. Control mice received a non-coding vector encoding green fluorescent protein. Results In the young cohort, the treatment restored expression of enzyme activity, normalized lipid profiles and body weight, mitigated enlargement of the liver and spleen, and reduced steatosis, inflammation, and fibrosis in the liver. These effects were associated with rescue of autophagic flux and mitochondrial function, as well as reduction of endoplasmic reticulum stress. Notably, the observed effects were much weaker when gene therapy with the same dose was conducted in the old cohort. Conclusions These findings suggest that P6-13/rscAAV8, when delivered early enough, may mitigate or even prevent the pathology of lysosomal acid lipase deficiency.

Open article ↗



2026-04-19 | Secreted enzyme uptake masks the in vivo phenotype of macrophage-specific lysosomal acid lipase deletion.

Lysosomal acid lipase (LAL) is so far the only known intracellular enzyme that is capable of hydrolyzing triglycerides and cholesteryl esters at an acidic pH inside the lysosome. Mutations in the LAL-encoding Lipa gene cause a rare autosomal recessive lysosomal storage disorder in humans with massive lipid accumulation. In mice, the loss of systemic LAL is associated with severe lipid accumulation, particularly in the liver and small intestine, accompanied by infiltration of lipid-filled CD68+-TREM2+ macrophages. We hypothesize that macrophages are among the key players in LAL deficiency and are responsible for lipid accumulation in the affected tissues. We generated macrophage (mac)- and macrophage/enterocyte-specific (mac/int-) LAL KO mice and performed morphological, histopathological, and functional analyses under chow- and high-fat/high-cholesterol diet-fed conditions. We observed that neither macLAL-KO nor mac/int-LAL KO mice replicated the phenotype of whole-body LAL KO mice, as lipoprotein secretion, lipid absorption, and lipid accumulation remained unaffected. However, the absence of macrophage LAL ameliorated diet-induced obesity in both mouse lines. Notably, the lipid accumulation observed in the lysosomes of macrophages from whole-body LAL KO mice was absent in macrophages from macLAL-KO mice, attributable to residual LAL enzyme activity despite genetic ablation. Treatment of macrophages from whole-body LAL KO mice with conditioned medium of hepatocytes from macLAL-KO mice effectively prevented lipid accumulation. These findings suggest that LAL secreted from hepatocytes, macrophages, and possibly other cell types in vivo corrects the phenotype of cell type-specific LAL deficiency, a key insight for guiding future gene therapy strategies.

Open article ↗



2026-03-29 | Lysosomal cholesteryl ester hydrolysis drives white matter repair by reprogramming microglia into a novel reparative state.

White matter repair relies on microglial clearance of cholesterol-rich myelin debris. Microglia have been reported to predominantly depend on de novo sterol synthesis to support this repair process. Lysosomal acid lipase (LAL) is the only known lysosomal enzyme capable of hydrolyzing cholesterol esters. In stark contrast to previous studies, we demonstrate here that LAL-mediated lysosomal lipolysis—not de novo sterol synthesis—serves as a central determinant of the microglial capacity to drive white matter repair. Using single-cell RNA sequencing, we identified a novel reparative microglial state characterized by simultaneously high expression of glycoprotein nonmetastatic melanoma protein B (GPNMB) and LAL. Following white matter injury, GPNMB+ microglia expanded and constituted the major microglial subset responsible for myelin debris engulfment. However, GPNMB+ microglia displayed context-dependent capacity to digest internalized myelin debris and mediate remyelination, with marked differences between reparable white matter injury and nonregenerative injury induced by white matter stroke (WMS). Transcriptomic profiling identified LAL as a key regulator of the reparative phenotype in GPNMB+ microglia. Independent of cytosolic lipases—widely regarded as synergistic mediators of LAL in cholesteryl ester hydrolysis, microglial LAL was both indispensable for myelin debris clearance and spontaneous remyelination in the reparable injury model, and sufficient to restore these processes following WMS-induced irreparable white matter injury. Mechanistically, LAL-mediated lysosomal lipolysis constituted the primary pathway for cholesteryl ester hydrolysis in microglia after white matter injury. This pathway converted cholesteryl esters into free cholesterol and activates liver X receptors (LXRs), both of which were required to reprogram microglial into the reparative state. Consistently, LXR activation alone was insufficient to rescue defective white matter repair caused by LAL deficiency. Hydroxypropyl-β-cyclodextrin (HβCD), an FDA-approved drug carrier, effectively lowers intracellular cholesterol levels through incompletely defined mechanisms. HβCD specifically upregulated LAL expression within white matter lesions and promoted remyelination via a LAL-dependent manner following WMS, supporting its potential as a therapeutic agent for WMS. Collectively, this study identifies lysosomal cholesterol ester hydrolysis as a novel therapeutic target for the treatment of irreversible white matter injury.

Open article ↗



2026-02-01 | Lysosomal acid lipase is essential in cholesterol-mediated mTORC1 signaling activation by maintaining a balance between cholesterol ester and free cholesterol in zebrafish

Cholesterol, as a signaling molecule, plays a critical role in regulating the mTORC1 signaling pathway within cells. Lysosomal acid lipase (LAL) is responsible for hydrolyzing cholesterol ester and triglyceride in lysosomes. However, the involvement of LAL in the regulation of the mTORC1 signaling pathway in animals remains controversial. Our study found that lal -deficient zebrafish exhibited retarded growth and reduced body protein content compared to wild type zebrafish. Correspondingly, the mTORC1 signaling pathway was significantly inhibited in the liver of lal −/− zebrafish. Additionally, both lal knockdown and lalistat (LAL inhibitor) treatments led to the accumulation of cholesterol ester (CE) and a decrease in free cholesterol (FC) within lysosomes of zebrafish liver (ZFL) cells. This imbalance inhibited the recruitment of mTORC1 to the lysosomal surface and suppressed the mTORC1 signaling pathway. Moreover, FC treatment promoted the recruitment of mTORC1 to the lysosomal surface and activated the mTORC1 signaling pathway regardless of LAL, whereas LDL-dependent mTORC1 activation required LAL. However, knockdown of slc38a9 (a cholesterol sensor) blocked the recruitment of mTORC1 in ZFL cells treated with FC or LDL. Furthermore, the interaction between P14 (a component of Ragulator complex) and RagA/C was weakened in ZFL cells following treatment with FC or LDL but was enhanced upon slc38a9 knockdown. In addition, both lal siRNA and lalistat treatments increased the interaction between P14 and RagA/C. Our findings indicated that LAL dysfunction hindered the recruitment and activation of mTORC1 through the Slc38a9-mediated lysosomal mTORC1-scaffolding complex in ZFL cells. This inhibition was associated with a decrease in lysosomal FC, which is detected by cholesterol sensor SLC38A9. Therefore, interventions targeting the role of LAL role in the hydrolysis of cholesterol esters within lysosomes could offer promising therapeutic strategies for diseases associated with dysregulated mTORC1 signaling in animals. • Lal -deficient zebrafish exhibited retarded growth and lower body protein content. • Lal -deficiency decreased lysosomal free cholesterol content in zebrafish liver cells. • Lysosomal cholesterol level regulated recruitment and activation of mTORC1 through Slc38a9.

Open article ↗



Access all drug discovery papers and probability of success in trials forecasts:

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Drug Discovery Landscape

2 orphan drug designations for Lysosomal acid lipase deficiency, including 2 approved therapies.

2 orphan drug designations for Lysosomal acid lipase deficiency, including 2 approved therapies.

Drug

Therapy type

Regulator

Orphan designation

Approval

Sponsor

Recombinant human lysosomal acid lipase [Kanuma]

proteins

EMA

2010-12-17

2015-09-01

Alexion Europe SAS

sebelipase alfa [Kanuma]

proteins

FDA

2010-07-01

2015-12-08

Alexion Pharmaceuticals

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New York, USA.

At Explority, we build first-of-its-kind AI to bring clarity to the earliest and riskiest stages of pharmaceutical research by forecasting which therapies are most likely to succeed. Explority AI web and mobile applications are properties of the Explority AI Inc., a company registered in the United States (File No. 10320493).
For all questions: support@explority.ai

Copyright © 2026 Explority AI Inc.

Explority AI logo

228 Park Ave S,
New York, USA.

At Explority, we build first-of-its-kind AI to bring clarity to the earliest and riskiest stages of pharmaceutical research by forecasting which therapies are most likely to succeed. Explority AI web and mobile applications are properties of the Explority AI Inc., a company registered in the United States (File No. 10320493).
For all questions: support@explority.ai

Copyright © 2026 Explority AI Inc.

Explority AI logo

228 Park Ave S,
New York, USA.

At Explority, we build first-of-its-kind AI to bring clarity to the earliest and riskiest stages of pharmaceutical research by forecasting which therapies are most likely to succeed. Explority AI web and mobile applications are properties of the Explority AI Inc., a company registered in the United States (File No. 10320493).
For all questions: support@explority.ai

Copyright © 2026 Explority AI Inc.