AI Drug Discovery for Pharma and Biotech

Drug discovery

5

drugs

With orphan designations

Overview

Autoimmune pulmonary alveolar proteinosis (aPAP) is a rare interstitial lung disease caused by neutralizing autoantibodies against granulocyte-macrophage colony-stimulating factor (GM-CSF), leading to impaired surfactant clearance and progressive respiratory insufficiency. Diagnosis relies on high-resolution CT findings, bronchoalveolar lavage with PAS-positive material, and serum GM-CSF autoantibody detection [1][5][6]. Clinical presentation typically includes insidious dyspnea, cough, and fatigue, with variable progression from spontaneous remission to respiratory failure [7][12]. Current management includes whole-lung lavage, inhaled GM-CSF therapy, and emerging biologic therapies [3][8][13].

Population

  • Prevalence ranges from 6.2-26.6/million in Japan to ~7/million in the US [1][2][11]

  • Most common in adults aged 30-50 years, though pediatric cases occur [5][12]

  • No sex or racial predilection; smoking and silica exposure are risk factors [1][11]

Burden

  • Diagnostic delays average 18 months due to non-specific symptoms [5][12]

  • 20% develop pulmonary fibrosis; 28% experience secondary infections [7][15]

  • Annual healthcare costs exceed $60k/patient for advanced cases [4][15]

Therapies

  1. Whole-lung lavage: Gold standard for symptomatic relief, effective in 80% of cases [3][15]

  2. Inhaled GM-CSF (molgramostim): 70% response rate in clinical trials, reduces treatment burden vs lavage [8][13][15]

  3. Rituximab: Considered for refractory cases through B-cell depletion [17][19]

Categories: rare respiratory diseases, rare transplant-related disorders

Research Papers

221 drug discovery papers related to Autoimmune pulmonary alveolar proteinosis, with 3 first-in-class and 1 next-in-class early-stage therapies forecasted to outperform the average preclinical success rate. Recent publications:

221 drug discovery papers related to Autoimmune pulmonary alveolar proteinosis, with 3 first-in-class and 1 next-in-class early-stage therapies forecasted to outperform the average preclinical success rate. Recent publications:

2026-05-01 | A93-08 Human Bone Marrow-derived Mesenchymal Stem Cell Therapy For Autoimmune Pulmonary Alveolar Proteinosis: A First-in-human Phase Iia Clinical Trial

Abstract Rationale Autoimmune pulmonary alveolar proteinosis (aPAP) is characterized by impaired alveolar macrophage function and elevated anti-granulocyte-macrophage colony-stimulating factor (GM-CSF) autoantibodies. Previous studies demonstrated that human bone marrow-derived mesenchymal stem cells (hBMMSCs) can remodel the alveolar immune microenvironment and enhance macrophage phagocytic function. We conducted the first clinical study of hBMMSC therapy for aPAP to evaluate its safety and preliminary efficacy. Methods This phase IIa, open-label, single-arm clinical trial enrolled 10 aPAP patients, assigned to three groups: low-dose (1 × 106 cells/kg, single infusion), high-dose (2 × 106 cells/kg, single infusion), and high-dose repeated (2 × 106 cells/kg, two infusions two weeks apart), all via intravenous infusion. The primary endpoint was change in alveolar-arterial oxygen gradient (A-aDO2) from baseline to 24 weeks. Safety and tolerability were assessed by incidence of serious adverse events (SAEs). Results Of 10 subjects enrolled, 3 withdrew and 7 completed 24-week evaluation. No treatment-related SAEs occurred. In 7 evaluable subjects, A-aDO2 and oxygenation index (P/F ratio) improved significantly at 24 weeks compared with baseline (both p < 0.05). Repeated high-dose infusion produced greater A-aDO2 improvement than single-dose groups. Conclusion This first clinical trial of hBMMSC therapy for aPAP demonstrates that the treatment is safe, well tolerated, and improves A-aDO2 and P/F ratio. Repeated dosing appears more effective than a single infusion, providing initial real-world clinical evidence supporting potential therapeutic application. This abstract is funded by: Jiuzhitang Maker(Beijing) Cell Technology Co.Ltd

Open article ↗



2026-02-20 | A Case of Autoimmune Pulmonary Alveolar Proteinosis.

Chemotherapeutic agents or regular doses of Rituximab may represent a potential therapeutic option for refractory cases of autoimmune pulmonary alveolar proteinosis.

Open article ↗



2026-02-19 | Significant but Temporary Efficacy of Statin for a Patient With Severe Autoimmune Pulmonary Alveolar Proteinosis: A Case Report.

Autoimmune pulmonary alveolar proteinosis (APAP) is a rare autoimmune lung disorder characterised by the presence of anti-granulocyte-macrophage colony-stimulating factor (GM-CSF) antibodies. Whole-lung lavage (WLL) therapy remains the standard treatment for severe cases. Recently, inhaled GM-CSF therapy has been approved in Japan; however, the cost of the treatment remains a limiting factor. Several reports have suggested that oral statin therapy may be a promising therapeutic option for APAP. Herein, we report a case of severe APAP that underwent WLL therapy twice and achieved an excellent response and remarkable clinical resolution of respiratory failure after the initiation of oral statin therapy. Remarkable improvements in oxygen saturation, blood gas analysis, serum biomarker levels and pulmonary function test results were observed after statin administration. However, the efficacy was temporary, and respiratory failure relapsed 2 years after the initiation of statin therapy. Statin therapy for APAP was deemed effective but potentially temporary.

Open article ↗



2026-05-01 | A93-08 Human Bone Marrow-derived Mesenchymal Stem Cell Therapy For Autoimmune Pulmonary Alveolar Proteinosis: A First-in-human Phase Iia Clinical Trial

Abstract Rationale Autoimmune pulmonary alveolar proteinosis (aPAP) is characterized by impaired alveolar macrophage function and elevated anti-granulocyte-macrophage colony-stimulating factor (GM-CSF) autoantibodies. Previous studies demonstrated that human bone marrow-derived mesenchymal stem cells (hBMMSCs) can remodel the alveolar immune microenvironment and enhance macrophage phagocytic function. We conducted the first clinical study of hBMMSC therapy for aPAP to evaluate its safety and preliminary efficacy. Methods This phase IIa, open-label, single-arm clinical trial enrolled 10 aPAP patients, assigned to three groups: low-dose (1 × 106 cells/kg, single infusion), high-dose (2 × 106 cells/kg, single infusion), and high-dose repeated (2 × 106 cells/kg, two infusions two weeks apart), all via intravenous infusion. The primary endpoint was change in alveolar-arterial oxygen gradient (A-aDO2) from baseline to 24 weeks. Safety and tolerability were assessed by incidence of serious adverse events (SAEs). Results Of 10 subjects enrolled, 3 withdrew and 7 completed 24-week evaluation. No treatment-related SAEs occurred. In 7 evaluable subjects, A-aDO2 and oxygenation index (P/F ratio) improved significantly at 24 weeks compared with baseline (both p < 0.05). Repeated high-dose infusion produced greater A-aDO2 improvement than single-dose groups. Conclusion This first clinical trial of hBMMSC therapy for aPAP demonstrates that the treatment is safe, well tolerated, and improves A-aDO2 and P/F ratio. Repeated dosing appears more effective than a single infusion, providing initial real-world clinical evidence supporting potential therapeutic application. This abstract is funded by: Jiuzhitang Maker(Beijing) Cell Technology Co.Ltd

Open article ↗



2026-02-20 | A Case of Autoimmune Pulmonary Alveolar Proteinosis.

Chemotherapeutic agents or regular doses of Rituximab may represent a potential therapeutic option for refractory cases of autoimmune pulmonary alveolar proteinosis.

Open article ↗



2026-02-19 | Significant but Temporary Efficacy of Statin for a Patient With Severe Autoimmune Pulmonary Alveolar Proteinosis: A Case Report.

Autoimmune pulmonary alveolar proteinosis (APAP) is a rare autoimmune lung disorder characterised by the presence of anti-granulocyte-macrophage colony-stimulating factor (GM-CSF) antibodies. Whole-lung lavage (WLL) therapy remains the standard treatment for severe cases. Recently, inhaled GM-CSF therapy has been approved in Japan; however, the cost of the treatment remains a limiting factor. Several reports have suggested that oral statin therapy may be a promising therapeutic option for APAP. Herein, we report a case of severe APAP that underwent WLL therapy twice and achieved an excellent response and remarkable clinical resolution of respiratory failure after the initiation of oral statin therapy. Remarkable improvements in oxygen saturation, blood gas analysis, serum biomarker levels and pulmonary function test results were observed after statin administration. However, the efficacy was temporary, and respiratory failure relapsed 2 years after the initiation of statin therapy. Statin therapy for APAP was deemed effective but potentially temporary.

Open article ↗



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Drug Discovery Landscape

5 orphan drug designations for Autoimmune pulmonary alveolar proteinosis.

5 orphan drug designations for Autoimmune pulmonary alveolar proteinosis.

Drug

Therapy type

Regulator

Orphan designation

Approval

Sponsor

Sargramostim

proteins

EMA

2024-06-28

CATS Consultants GmbH

L-methionine

other

EMA

2024-06-28

Imagine Institut Des Maladies Genetiques Necker Enfants Malades

sargramostim

proteins

FDA

2018-10-22

Partner Therapeutics, Inc.

Granulocyte macrophage colony stimulating factor

proteins

EMA

2013-07-17

Savara ApS

recombinant human GM-CSF, molgramostim

proteins

FDA

2012-10-31

Savara Inc.

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At Explority, we build first-of-its-kind AI to bring clarity to the earliest and riskiest stages of pharmaceutical research by forecasting which therapies are most likely to succeed. Explority AI web and mobile applications are properties of the Explority AI Inc., a company registered in the United States (File No. 10320493).
For all questions: support@explority.ai

Copyright © 2026 Explority AI Inc.

Explority AI logo

228 Park Ave S,
New York, USA.

At Explority, we build first-of-its-kind AI to bring clarity to the earliest and riskiest stages of pharmaceutical research by forecasting which therapies are most likely to succeed. Explority AI web and mobile applications are properties of the Explority AI Inc., a company registered in the United States (File No. 10320493).
For all questions: support@explority.ai

Copyright © 2026 Explority AI Inc.

Explority AI logo

228 Park Ave S,
New York, USA.

At Explority, we build first-of-its-kind AI to bring clarity to the earliest and riskiest stages of pharmaceutical research by forecasting which therapies are most likely to succeed. Explority AI web and mobile applications are properties of the Explority AI Inc., a company registered in the United States (File No. 10320493).
For all questions: support@explority.ai

Copyright © 2026 Explority AI Inc.